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tasor2 transcription activation suppressor family member 2 [ Thunnus maccoyii (southern bluefin tuna) ]

Gene ID: 121896745, updated on 12-Sep-2024

Summary

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Gene symbol
tasor2
Gene description
transcription activation suppressor family member 2
See related
EnsemblRapid:ENSTMYG00005026882
Gene type
protein coding
RefSeq status
MODEL
Organism
Thunnus maccoyii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Pelagiaria; Scombriformes; Scombridae; Thunnus
Orthologs
zebrafish all
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Genomic context

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See tasor2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
24
Annotation release Status Assembly Chr Location
100 current fThuMac1.1 (GCF_910596095.1) 5 NC_056537.1 (12926234..12952597)

Chromosome 5 - NC_056537.1Genomic Context describing neighboring genes Neighboring gene neuroepithelial cell-transforming gene 1 protein-like Neighboring gene ankyrin repeat and SOCS box containing 13b Neighboring gene TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto Neighboring gene uncharacterized LOC121896898

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056537.1 Chromosome 5 Reference fThuMac1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of gene expression, epigenetic IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein tasor2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Thunnus maccoyii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fThuMac1.1 Primary Assembly

Genomic

  1. NC_056537.1 Reference fThuMac1.1 Primary Assembly

    Range
    12926234..12952597
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042410706.1 → XP_042266640.1  uncharacterized protein tasor2 isoform X1

    Conserved Domains (1) summary
    COG5271
    Location:1743 → 2068
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]

  2. XM_042410709.1 → XP_042266643.1  uncharacterized protein tasor2 isoform X4

    Conserved Domains (1) summary
    COG5271
    Location:1597 → 1922
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]

  3. XM_042410708.1 → XP_042266642.1  uncharacterized protein tasor2 isoform X3

    Related
    ENSTMYP00005063182.1, ENSTMYT00005072337.1
    Conserved Domains (1) summary
    COG5271
    Location:1716 → 2041
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]

  4. XM_042410707.1 → XP_042266641.1  uncharacterized protein tasor2 isoform X2

    Conserved Domains (1) summary
    COG5271
    Location:1720 → 2045
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

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