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colt carnitine/acylcarnitine carrier protein colt, mitochondrial [ Homarus americanus (American lobster) ]

Gene ID: 121876660, updated on 3-Jul-2024

Summary

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Gene symbol
colt
Gene description
carnitine/acylcarnitine carrier protein colt, mitochondrial
Locus tag
Hamer_G012661
See related
EnsemblRapid:LOC121876660
Gene type
protein coding
RefSeq status
MODEL
Organism
Homarus americanus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Astacidea; Nephropoidea; Nephropidae; Homarus
Also known as
Slc25a20-L
Orthologs
fruit fly all
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Genomic context

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See colt in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current GMGI_Hamer_2.0 (GCF_018991925.1) Unplaced Scaffold NW_024742238.1 (2959796..2985657, complement)

NW_024742238.1Genomic Context describing neighboring genes Neighboring gene methyltransferase-like protein 7A Neighboring gene uncharacterized LOC121876616 Neighboring gene macrophage receptor MARCO-like Neighboring gene thymosin beta cib

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024742238 Unplaced Scaffold Reference GMGI_Hamer_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Neuropeptidergic Signaling in the American Lobster Homarus americanus: New Insights from High-Throughput Nucleotide Sequencing. Christie AE, et al. PLoS One, 2015. PMID 26716450, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Homarus americanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GMGI_Hamer_2.0 Primary Assembly

Genomic

  1. NW_024742238.1 Reference GMGI_Hamer_2.0 Primary Assembly

    Range
    2959796..2985657 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042381996.1 → XP_042237930.1  mitochondrial carnitine/acylcarnitine carrier protein-like isoform X2

    UniProtKB/TrEMBL
    A0A8J5JPW6
    Related
    XP_042237930.1, XM_042381996.1
    Conserved Domains (1) summary
    PTZ00169
    Location:7 → 273
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional

  2. XM_042381995.1 → XP_042237929.1  mitochondrial carnitine/acylcarnitine carrier protein-like isoform X1

    UniProtKB/TrEMBL
    A0A8J5JPW6
    Related
    XP_042237929.1, XM_042381995.1
    Conserved Domains (1) summary
    PTZ00169
    Location:3 → 275
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
Nucleotide Protein
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