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LOC121798722 uncharacterized LOC121798722 [ Salvia splendens ]

Gene ID: 121798722, updated on 7-Dec-2023

Summary

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Gene symbol
LOC121798722
Gene description
uncharacterized LOC121798722
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvia splendens
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salviinae; Salvia; Salvia subgen. Calosphace; core Calosphace
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Genomic context

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See LOC121798722 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
100 current SspV2 (GCF_004379255.1) 4 NC_056035.1 (14046725..14052891, complement)

Chromosome 4 - NC_056035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121798725 Neighboring gene uncharacterized LOC121798723 Neighboring gene zinc finger protein WIP2-like Neighboring gene transcription factor MYC2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056035.1 Chromosome 4 Reference SspV2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC121798722

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvia splendens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SspV2 Primary Assembly

Genomic

  1. NC_056035.1 Reference SspV2 Primary Assembly

    Range
    14046725..14052891 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042197863.1 → XP_042053797.1  uncharacterized protein LOC121798722

    Conserved Domains (1) summary
    PLN00049
    Location:123 → 317
    PLN00049; carboxyl-terminal processing protease; Provisional
Nucleotide Protein
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