U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC121798210 sulfoquinovosyl transferase SQD2-like [ Salvia splendens ]

Gene ID: 121798210, updated on 7-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC121798210
Gene description
sulfoquinovosyl transferase SQD2-like
Locus tag
SASPL_102011
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvia splendens
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salviinae; Salvia; Salvia subgen. Calosphace; core Calosphace
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC121798210 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
100 current SspV2 (GCF_004379255.1) 1 NC_056032.1 (31662557..31666018)

Chromosome 1 - NC_056032.1Genomic Context describing neighboring genes Neighboring gene protein argonaute 4B-like Neighboring gene protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like Neighboring gene polyadenylate-binding protein 1-like 2 Neighboring gene uncharacterized acetyltransferase At3g50280

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_056032.1 Chromosome 1 Reference SspV2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
sulfoquinovosyl transferase SQD2-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Salvia splendens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SspV2 Primary Assembly

Genomic

  1. NC_056032.1 Reference SspV2 Primary Assembly

    Range
    31662557..31666018
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042197094.1 → XP_042053028.1  sulfoquinovosyl transferase SQD2-like

    UniProtKB/TrEMBL
    A0A8X8YNJ1
    Conserved Domains (1) summary
    PLN02871
    Location:1 → 429
    PLN02871; UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases