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LOC121796025 carboxyl-terminal-processing peptidase 2, chloroplastic-like [ Salvia splendens ]

Gene ID: 121796025, updated on 7-Dec-2023

Summary

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Gene symbol
LOC121796025
Gene description
carboxyl-terminal-processing peptidase 2, chloroplastic-like
Locus tag
SASPL_109375
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvia splendens
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salviinae; Salvia; Salvia subgen. Calosphace; core Calosphace
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Genomic context

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See LOC121796025 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
15
Annotation release Status Assembly Chr Location
100 current SspV2 (GCF_004379255.1) 3 NC_056034.1 (40043158..40048578, complement)

Chromosome 3 - NC_056034.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121797018 Neighboring gene beta-amylase 1, chloroplastic-like Neighboring gene small nucleolar RNA Z247 Neighboring gene ammonium transporter 1 member 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056034.1 Chromosome 3 Reference SspV2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-type peptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carboxyl-terminal-processing peptidase 2, chloroplastic-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvia splendens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SspV2 Primary Assembly

Genomic

  1. NC_056034.1 Reference SspV2 Primary Assembly

    Range
    40043158..40048578 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042194718.1 → XP_042050652.1  carboxyl-terminal-processing peptidase 2, chloroplastic-like isoform X4

    UniProtKB/TrEMBL
    A0A8X8YJX8
    Conserved Domains (1) summary
    PLN00049
    Location:113 → 500
    PLN00049; carboxyl-terminal processing protease; Provisional

  2. XM_042194716.1 → XP_042050650.1  carboxyl-terminal-processing peptidase 2, chloroplastic-like isoform X3

    UniProtKB/TrEMBL
    A0A8X8YJX8
    Conserved Domains (1) summary
    PLN00049
    Location:117 → 504
    PLN00049; carboxyl-terminal processing protease; Provisional

  3. XM_042194714.1 → XP_042050648.1  carboxyl-terminal-processing peptidase 2, chloroplastic-like isoform X1

    UniProtKB/TrEMBL
    A0A8X8YJX8
    Conserved Domains (1) summary
    PLN00049
    Location:148 → 535
    PLN00049; carboxyl-terminal processing protease; Provisional

  4. XM_042194721.1 → XP_042050655.1  carboxyl-terminal-processing peptidase 2, chloroplastic-like isoform X7

    Conserved Domains (1) summary
    PLN00049
    Location:17 → 404
    PLN00049; carboxyl-terminal processing protease; Provisional

  5. XM_042194720.1 → XP_042050654.1  carboxyl-terminal-processing peptidase 2, chloroplastic-like isoform X6

    UniProtKB/TrEMBL
    A0A8X8YJX8
    Conserved Domains (1) summary
    PLN00049
    Location:94 → 481
    PLN00049; carboxyl-terminal processing protease; Provisional

  6. XM_042194719.1 → XP_042050653.1  carboxyl-terminal-processing peptidase 2, chloroplastic-like isoform X5

    UniProtKB/TrEMBL
    A0A8X8YJX8
    Conserved Domains (1) summary
    PLN00049
    Location:98 → 485
    PLN00049; carboxyl-terminal processing protease; Provisional

  7. XM_042194715.1 → XP_042050649.1  carboxyl-terminal-processing peptidase 2, chloroplastic-like isoform X2

    UniProtKB/TrEMBL
    A0A8X8YJX8
    Conserved Domains (1) summary
    PLN00049
    Location:129 → 516
    PLN00049; carboxyl-terminal processing protease; Provisional
Nucleotide Protein
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