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LOC121777406 mitochondrial carnitine/acylcarnitine carrier-like protein [ Salvia splendens ]

Gene ID: 121777406, updated on 7-Dec-2023

Summary

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Gene symbol
LOC121777406
Gene description
mitochondrial carnitine/acylcarnitine carrier-like protein
Locus tag
SASPL_146937
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvia splendens
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salviinae; Salvia; Salvia subgen. Calosphace; core Calosphace
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Genomic context

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See LOC121777406 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
3
Annotation release Status Assembly Chr Location
100 current SspV2 (GCF_004379255.1) 18 NC_056049.1 (7981690..7984177, complement)

Chromosome 18 - NC_056049.1Genomic Context describing neighboring genes Neighboring gene DNA repair protein RAD4-like Neighboring gene HMG-Y-related protein A-like Neighboring gene HMG1/2-like protein Neighboring gene protein RSI-1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056049.1 Chromosome 18 Reference SspV2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvia splendens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SspV2 Primary Assembly

Genomic

  1. NC_056049.1 Reference SspV2 Primary Assembly

    Range
    7981690..7984177 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042174662.1 → XP_042030596.1  mitochondrial carnitine/acylcarnitine carrier-like protein

    UniProtKB/TrEMBL
    A0A8X8Z622
    Conserved Domains (1) summary
    pfam00153
    Location:211 → 297
    Mito_carr; Mitochondrial carrier protein

  2. XM_042174663.1 → XP_042030597.1  mitochondrial carnitine/acylcarnitine carrier-like protein

    UniProtKB/TrEMBL
    A0A8X8Z622
    Conserved Domains (1) summary
    pfam00153
    Location:211 → 297
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
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