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LOC121738064 irregular chiasm C-roughest protein-like [ Aricia agestis (brown argus) ]

Gene ID: 121738064, updated on 7-Dec-2023

Summary

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Gene symbol
LOC121738064
Gene description
irregular chiasm C-roughest protein-like
See related
EnsemblRapid:ENSAAGG00005008676
Gene type
protein coding
RefSeq status
MODEL
Organism
Aricia agestis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Papilionoidea; Lycaenidae; Polyommatinae; Aricia
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Genomic context

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See LOC121738064 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
21
Annotation release Status Assembly Chr Location
100 current ilAriAges1.1 (GCF_905147365.1) 22 NC_056427.1 (4263415..4365166, complement)

Chromosome 22 - NC_056427.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121738057 Neighboring gene uncharacterized LOC121738157 Neighboring gene uncharacterized LOC121738043 Neighboring gene uncharacterized LOC121738042 Neighboring gene zinc finger MYM-type protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056427.1 Chromosome 22 Reference ilAriAges1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
irregular chiasm C-roughest protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aricia agestis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ilAriAges1.1

Genomic

  1. NC_056427.1 Reference ilAriAges1.1

    Range
    4263415..4365166 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042129887.1 → XP_041985821.1  irregular chiasm C-roughest protein-like isoform X1

    Conserved Domains (5) summary
    smart00409
    Location:338 → 415
    IG; Immunoglobulin
    smart00410
    Location:39 → 133
    IG_like; Immunoglobulin like
    PRK11901
    Location:662 → 797
    PRK11901; hypothetical protein; Reviewed
    cd00096
    Location:50 → 54
    Ig; Ig strand B [structural motif]
    cl11960
    Location:417 → 514
    Ig; Immunoglobulin domain

  2. XM_042129888.1 → XP_041985822.1  irregular chiasm C-roughest protein-like isoform X2

    Related
    ENSAAGP00005012921.1, ENSAAGT00005014201.1
    Conserved Domains (5) summary
    smart00409
    Location:338 → 414
    IG; Immunoglobulin
    smart00410
    Location:39 → 133
    IG_like; Immunoglobulin like
    PRK11901
    Location:661 → 796
    PRK11901; hypothetical protein; Reviewed
    cd00096
    Location:50 → 54
    Ig; Ig strand B [structural motif]
    cl11960
    Location:416 → 513
    Ig; Immunoglobulin domain

  3. XM_042129890.1 → XP_041985824.1  irregular chiasm C-roughest protein-like isoform X4

    Related
    ENSAAGP00005012919.1, ENSAAGT00005014199.1
    Conserved Domains (4) summary
    smart00409
    Location:39 → 133
    IG; Immunoglobulin
    smart00410
    Location:254 → 328
    IG_like; Immunoglobulin like
    cd00096
    Location:435 → 439
    Ig; Ig strand B [structural motif]
    cl11960
    Location:417 → 514
    Ig; Immunoglobulin domain

  4. XM_042129886.1 → XP_041985820.1  irregular chiasm C-roughest protein-like isoform X1

    Conserved Domains (5) summary
    smart00409
    Location:338 → 415
    IG; Immunoglobulin
    smart00410
    Location:39 → 133
    IG_like; Immunoglobulin like
    PRK11901
    Location:662 → 797
    PRK11901; hypothetical protein; Reviewed
    cd00096
    Location:50 → 54
    Ig; Ig strand B [structural motif]
    cl11960
    Location:417 → 514
    Ig; Immunoglobulin domain

  5. XM_042129889.1 → XP_041985823.1  irregular chiasm C-roughest protein-like isoform X3

    Conserved Domains (4) summary
    smart00409
    Location:39 → 133
    IG; Immunoglobulin
    smart00410
    Location:254 → 328
    IG_like; Immunoglobulin like
    cd00096
    Location:435 → 439
    Ig; Ig strand B [structural motif]
    cl11960
    Location:417 → 514
    Ig; Immunoglobulin domain
Nucleotide Protein
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