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LOC121726664 host cell factor 1-like [ Aricia agestis (brown argus) ]

Gene ID: 121726664, updated on 7-Dec-2023

Summary

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Gene symbol
LOC121726664
Gene description
host cell factor 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Aricia agestis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Papilionoidea; Lycaenidae; Polyommatinae; Aricia
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Genomic context

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See LOC121726664 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Annotation release Status Assembly Chr Location
100 current ilAriAges1.1 (GCF_905147365.1) 4 NC_056409.1 (470869..475151, complement)

Chromosome 4 - NC_056409.1Genomic Context describing neighboring genes Neighboring gene prothoracicostatic peptides-like Neighboring gene cytochrome b5-like Neighboring gene neuropeptides capa receptor-like Neighboring gene GATA zinc finger domain-containing protein 24-like Neighboring gene NEDD8 ultimate buster 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056409.1 Chromosome 4 Reference ilAriAges1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone methyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
host cell factor 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aricia agestis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ilAriAges1.1

Genomic

  1. NC_056409.1 Reference ilAriAges1.1

    Range
    470869..475151 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042114118.1 → XP_041970052.1  host cell factor 1-like

    Conserved Domains (3) summary
    PRK12688
    Location:517 → 825
    PRK12688; flagellin; Reviewed
    PLN02193
    Location:8 → 312
    PLN02193; nitrile-specifier protein
    sd00038
    Location:23 → 70
    Kelch; KELCH repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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