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BNC2 basonuclin zinc finger protein 2 [ Corvus kubaryi (Mariana crow) ]

Gene ID: 121676905, updated on 3-Aug-2024

Summary

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Gene symbol
BNC2
Gene description
basonuclin zinc finger protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus kubaryi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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See BNC2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current C.kubaryi_AGA036_p1.0 (GCF_017639235.1) Unplaced Scaffold NW_024582075.1 (12151636..12501229)

NW_024582075.1Genomic Context describing neighboring genes Neighboring gene centlein Neighboring gene uncharacterized LOC121657456 Neighboring gene uncharacterized LOC121676907 Neighboring gene uncharacterized LOC121657386 Neighboring gene coiled-coil domain containing 171

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024582075 Unplaced Scaffold Reference C.kubaryi_AGA036_p1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein basonuclin-2
Names
basonuclin 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus kubaryi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.kubaryi_AGA036_p1.0

Genomic

  1. NW_024582075.1 Reference C.kubaryi_AGA036_p1.0

    Range
    12151636..12501229
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042053948.1 → XP_041909882.1  zinc finger protein basonuclin-2 isoform X9

    Conserved Domains (2) summary
    sd00017
    Location:409 → 430
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:800 → 821
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_042053947.1 → XP_041909881.1  zinc finger protein basonuclin-2 isoform X8

    Conserved Domains (1) summary
    sd00017
    Location:409 → 430
    ZF_C2H2; C2H2 Zn finger [structural motif]

  3. XM_042053945.1 → XP_041909879.1  zinc finger protein basonuclin-2 isoform X7

    Conserved Domains (2) summary
    sd00017
    Location:409 → 430
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:800 → 821
    ZF_C2H2; C2H2 Zn finger [structural motif]

  4. XM_042053937.1 → XP_041909871.1  zinc finger protein basonuclin-2 isoform X1

    Conserved Domains (2) summary
    sd00017
    Location:1002 → 1023
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:800 → 821
    ZF_C2H2; C2H2 Zn finger [structural motif]

  5. XM_042053940.1 → XP_041909874.1  zinc finger protein basonuclin-2 isoform X4

    Conserved Domains (2) summary
    sd00017
    Location:994 → 1015
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:792 → 813
    ZF_C2H2; C2H2 Zn finger [structural motif]

  6. XM_042053942.1 → XP_041909876.1  zinc finger protein basonuclin-2 isoform X5

    Conserved Domains (2) summary
    sd00017
    Location:958 → 979
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:756 → 777
    ZF_C2H2; C2H2 Zn finger [structural motif]

  7. XM_042053939.1 → XP_041909873.1  zinc finger protein basonuclin-2 isoform X3

    Conserved Domains (2) summary
    sd00017
    Location:996 → 1017
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:794 → 815
    ZF_C2H2; C2H2 Zn finger [structural motif]

  8. XM_042053943.1 → XP_041909877.1  zinc finger protein basonuclin-2 isoform X5

    Conserved Domains (2) summary
    sd00017
    Location:958 → 979
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:756 → 777
    ZF_C2H2; C2H2 Zn finger [structural motif]

  9. XM_042053938.1 → XP_041909872.1  zinc finger protein basonuclin-2 isoform X2

    Conserved Domains (2) summary
    sd00017
    Location:1001 → 1022
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:799 → 820
    ZF_C2H2; C2H2 Zn finger [structural motif]

  10. XM_042053941.1 → XP_041909875.1  zinc finger protein basonuclin-2 isoform X5

    Conserved Domains (2) summary
    sd00017
    Location:958 → 979
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:756 → 777
    ZF_C2H2; C2H2 Zn finger [structural motif]

  11. XM_042053944.1 → XP_041909878.1  zinc finger protein basonuclin-2 isoform X6

    Conserved Domains (1) summary
    sd00017
    Location:941 → 962
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
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