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LOC121587937 irregular chiasm C-roughest protein-like [ Anopheles merus ]

Gene ID: 121587937, updated on 27-Mar-2024

Summary

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Gene symbol
LOC121587937
Gene description
irregular chiasm C-roughest protein-like
See related
VectorBase:AMEM21_003948
Gene type
protein coding
RefSeq status
MODEL
Organism
Anopheles merus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
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Genomic context

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See LOC121587937 in Genome Data Viewer
Location:
chromosome: X
Exon count:
8
Annotation release Status Assembly Chr Location
100 current AmerM5.1 (GCF_017562075.2) X NC_054081.1 (3837204..3906151)

Chromosome X - NC_054081.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121589391 Neighboring gene irregular chiasm C-roughest protein-like Neighboring gene tektin-3-like Neighboring gene xylulose kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054081.1 Chromosome X Reference AmerM5.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: irregular chiasm C-roughest protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Anopheles merus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AmerM5.1 Primary Assembly

Genomic

  1. NC_054081.1 Reference AmerM5.1 Primary Assembly

    Range
    3837204..3906151
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041905306.1 → XP_041761240.1  LOW QUALITY PROTEIN: irregular chiasm C-roughest protein-like

    UniProtKB/TrEMBL
    A0A182VPE7
    Conserved Domains (4) summary
    smart00408
    Location:363 → 414
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:55 → 149
    IG; Immunoglobulin
    cd00096
    Location:449 → 453
    Ig; Ig strand B [structural motif]
    cl11960
    Location:431 → 519
    Ig; Immunoglobulin domain
Nucleotide Protein Strain
Heading Accession and Version

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