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LOC121580950 dnaJ homolog subfamily B member 6 [ Coregonus clupeaformis (lake whitefish) ]

Gene ID: 121580950, updated on 28-May-2024

Summary

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Gene symbol
LOC121580950
Gene description
dnaJ homolog subfamily B member 6
See related
EnsemblRapid:ENSCCFG00005042440
Gene type
protein coding
RefSeq status
MODEL
Organism
Coregonus clupeaformis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Coregoninae; Coregonus
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Genomic context

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See LOC121580950 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
10
Annotation release Status Assembly Chr Location
101 current ASM2061545v1 (GCF_020615455.1) 14 NC_059205.1 (36683285..36701050, complement)
100 previous assembly ASM1839867v1 (GCF_018398675.1) 14 NC_055080.1 (27256039..27274154)

Chromosome 14 - NC_059205.1Genomic Context describing neighboring genes Neighboring gene potassium voltage-gated channel subfamily B member 2-like Neighboring gene transient receptor potential cation channel subfamily A member 1-like Neighboring gene uncharacterized LOC123492381 Neighboring gene tiggy-winkle hedgehog protein-like Neighboring gene protein canopy-1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coregonus clupeaformis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2061545v1 Primary Assembly

Genomic

  1. NC_059205.1 Reference ASM2061545v1 Primary Assembly

    Range
    36683285..36701050 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041896175.2 → XP_041752109.1  dnaJ homolog subfamily B member 6

    Related
    ENSCCFP00005098034.1, ENSCCFT00005105500.1
    Conserved Domains (1) summary
    PRK10767
    Location:4 → 139
    PRK10767; chaperone protein DnaJ; Provisional
Nucleotide Protein
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Gene LinkOut

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