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poglut1 protein O-glucosyltransferase 1 [ Coregonus clupeaformis (lake whitefish) ]

Gene ID: 121559251, updated on 28-May-2024

Summary

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Gene symbol
poglut1
Gene description
protein O-glucosyltransferase 1
See related
EnsemblRapid:ENSCCFG00005028561
Gene type
protein coding
RefSeq status
MODEL
Organism
Coregonus clupeaformis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Coregoninae; Coregonus
Orthologs
human zebrafish all
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Genomic context

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See poglut1 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
10
Annotation release Status Assembly Chr Location
101 current ASM2061545v1 (GCF_020615455.1) 16 NC_059207.1 (888605..892959)
100 previous assembly ASM1839867v1 (GCF_018398675.1) Unplaced Scaffold NW_024574497.1 (143641..148007)

Chromosome 16 - NC_059207.1Genomic Context describing neighboring genes Neighboring gene vang-like protein 1 Neighboring gene calsequestrin-2-like Neighboring gene translocase of inner mitochondrial membrane domain containing 1 Neighboring gene ATP-binding cassette sub-family C member 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-glucosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coregonus clupeaformis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2061545v1 Primary Assembly

Genomic

  1. NC_059207.1 Reference ASM2061545v1 Primary Assembly

    Range
    888605..892959
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041872545.2 → XP_041728479.2  protein O-glucosyltransferase 1

    Related
    ENSCCFP00005062390.1, ENSCCFT00005067935.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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