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LOC121548003 heparan sulfate glucosamine 3-O-sulfotransferase 6-like [ Coregonus clupeaformis (lake whitefish) ]

Gene ID: 121548003, updated on 28-May-2024

Summary

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Gene symbol
LOC121548003
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 6-like
See related
EnsemblRapid:ENSCCFG00005014369
Gene type
protein coding
RefSeq status
MODEL
Organism
Coregonus clupeaformis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Coregoninae; Coregonus
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Genomic context

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See LOC121548003 in Genome Data Viewer
Location:
chromosome: 31
Exon count:
2
Annotation release Status Assembly Chr Location
101 current ASM2061545v1 (GCF_020615455.1) 31 NC_059222.1 (9664358..9684962, complement)
100 previous assembly ASM1839867v1 (GCF_018398675.1) 31 NC_055097.1 (28657032..28677641, complement)

Chromosome 31 - NC_059222.1Genomic Context describing neighboring genes Neighboring gene MTOR associated protein, LST8 homolog (S. cerevisiae) Neighboring gene meiosis-specific with OB domain-containing protein-like Neighboring gene methionine sulfoxide reductase B1b Neighboring gene neuralized E3 ubiquitin protein ligase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coregonus clupeaformis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2061545v1 Primary Assembly

Genomic

  1. NC_059222.1 Reference ASM2061545v1 Primary Assembly

    Range
    9664358..9684962 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041859406.2 → XP_041715340.2  heparan sulfate glucosamine 3-O-sulfotransferase 6-like

    Related
    ENSCCFP00005031588.1, ENSCCFT00005033985.1
Nucleotide Protein
Heading Accession and Version

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