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LOC121539116 solute carrier family 2, facilitated glucose transporter member 1 [ Coregonus clupeaformis (lake whitefish) ]

Gene ID: 121539116, updated on 28-May-2024

Summary

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Gene symbol
LOC121539116
Gene description
solute carrier family 2, facilitated glucose transporter member 1
See related
EnsemblRapid:ENSCCFG00005032374
Gene type
protein coding
RefSeq status
MODEL
Organism
Coregonus clupeaformis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Coregoninae; Coregonus
Orthologs
zebrafish all
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Genomic context

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See LOC121539116 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
11
Annotation release Status Assembly Chr Location
101 current ASM2061545v1 (GCF_020615455.1) 25 NC_059216.1 (20895492..20930117)
100 previous assembly ASM1839867v1 (GCF_018398675.1) 25 NC_055091.1 (10157883..10195043, complement)

Chromosome 25 - NC_059216.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123481875 Neighboring gene uncharacterized LOC121538753 Neighboring gene transcription factor Sox-11-like Neighboring gene doublecortin domain-containing protein 2C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexose transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monosaccharide transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier family 2, facilitated glucose transporter member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coregonus clupeaformis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2061545v1 Primary Assembly

Genomic

  1. NC_059216.1 Reference ASM2061545v1 Primary Assembly

    Range
    20895492..20930117
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041847372.2 → XP_041703306.1  solute carrier family 2, facilitated glucose transporter member 1

    Related
    ENSCCFP00005071676.1, ENSCCFT00005077395.1
    Conserved Domains (1) summary
    cl28910
    Location:15 → 457
    MFS; Major Facilitator Superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases