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cep104 centrosomal protein 104 [ Coregonus clupeaformis (lake whitefish) ]

Gene ID: 121538449, updated on 28-May-2024

Summary

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Gene symbol
cep104
Gene description
centrosomal protein 104
See related
EnsemblRapid:ENSCCFG00005050694
Gene type
protein coding
RefSeq status
MODEL
Organism
Coregonus clupeaformis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Coregoninae; Coregonus
Orthologs
human zebrafish all
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Genomic context

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See cep104 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
22
Annotation release Status Assembly Chr Location
101 current ASM2061545v1 (GCF_020615455.1) 24 NC_059215.1 (21288583..21362149, complement)
100 previous assembly ASM1839867v1 (GCF_018398675.1) 24 NC_055090.1 (46825440..46897846, complement)

Chromosome 24 - NC_059215.1Genomic Context describing neighboring genes Neighboring gene chromosome 24 C1orf174 homolog Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7-like Neighboring gene leucine-rich repeat-containing protein 47 Neighboring gene uncharacterized LOC121537267 Neighboring gene small integral membrane protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
centrosomal protein of 104 kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coregonus clupeaformis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2061545v1 Primary Assembly

Genomic

  1. NC_059215.1 Reference ASM2061545v1 Primary Assembly

    Range
    21288583..21362149 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041846465.2 → XP_041702399.1  centrosomal protein of 104 kDa isoform X3

    Related
    ENSCCFP00005116111.1, ENSCCFT00005126392.1
    Conserved Domains (1) summary
    PHA03247
    Location:284 → 417
    PHA03247; large tegument protein UL36; Provisional

  2. XM_041846464.2 → XP_041702398.1  centrosomal protein of 104 kDa isoform X2

    Conserved Domains (1) summary
    PHA03247
    Location:305 → 438
    PHA03247; large tegument protein UL36; Provisional

  3. XM_041846463.2 → XP_041702397.1  centrosomal protein of 104 kDa isoform X1

    Related
    ENSCCFP00005116112.1, ENSCCFT00005126393.1
    Conserved Domains (1) summary
    PHA03247
    Location:305 → 438
    PHA03247; large tegument protein UL36; Provisional
Nucleotide Protein
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