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zgc:154054 Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B-like [ Coregonus clupeaformis (lake whitefish) ]

Gene ID: 121531776, updated on 28-May-2024

Summary

Gene symbol
zgc:154054
Gene description
Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B-like
See related
EnsemblRapid:ENSCCFG00005011765
Gene type
protein coding
RefSeq status
MODEL
Organism
Coregonus clupeaformis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Coregoninae; Coregonus
Orthologs
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Genomic context

See zgc:154054 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
16
Annotation release Status Assembly Chr Location
101 current ASM2061545v1 (GCF_020615455.1) 2 NC_059193.1 (24098074..24116454, complement)
100 previous assembly ASM1839867v1 (GCF_018398675.1) 2 NC_055068.1 (17063202..17081580, complement)

Chromosome 2 - NC_059193.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121531763 Neighboring gene short coiled-coil protein B Neighboring gene saxitoxin and tetrodotoxin-binding protein 1 Neighboring gene matrix metalloproteinase-17-like

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in Golgi stack IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coregonus clupeaformis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2061545v1 Primary Assembly

Genomic

  1. NC_059193.1 Reference ASM2061545v1 Primary Assembly

    Range
    24098074..24116454 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041837229.1XP_041693163.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B-like isoform X2

    Related
    ENSCCFP00005025910.1, ENSCCFT00005027713.1
  2. XM_041837220.1XP_041693154.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B-like isoform X1

    Related
    ENSCCFP00005025909.1, ENSCCFT00005027712.1

RNA

  1. XR_005994190.1 RNA Sequence