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LOC121522234 acetylcholine receptor subunit alpha [ Cheilinus undulatus (humphead wrasse) ]

Gene ID: 121522234, updated on 7-Dec-2023

Summary

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Gene symbol
LOC121522234
Gene description
acetylcholine receptor subunit alpha
See related
EnsemblRapid:ENSCUDG00000010038
Gene type
protein coding
RefSeq status
MODEL
Organism
Cheilinus undulatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Cheilinus
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Genomic context

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See LOC121522234 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
9
Annotation release Status Assembly LG Location
100 current ASM1832078v1 (GCF_018320785.1) 15 NC_054879.1 (42594346..42609678)

Linkage Group 15 - NC_054879.1Genomic Context describing neighboring genes Neighboring gene activating transcription factor 2 Neighboring gene chimerin 1 Neighboring gene integral membrane protein GPR155-like Neighboring gene integral membrane protein GPR155-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054879.1 Chromosome 15 Reference ASM1832078v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylcholine-gated monoatomic cation-selective channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetylcholine receptor subunit alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cheilinus undulatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1832078v1 Primary Assembly

Genomic

  1. NC_054879.1 Reference ASM1832078v1 Primary Assembly

    Range
    42594346..42609678
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041806387.1 → XP_041662321.1  acetylcholine receptor subunit alpha

    Related
    ENSCUDP00000023721.1, ENSCUDT00000024087.1
    Conserved Domains (2) summary
    TIGR00860
    Location:14 → 436
    LIC; Cation transporter family protein
    cd19014
    Location:13 → 221
    LGIC_ECD_nAChR_A1; extracellular domain of nicotinic acetylcholine receptor subunit alpha 1 (CHRNA1)
Nucleotide Protein
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