U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC121518935 acetylcholine receptor subunit gamma-like [ Cheilinus undulatus (humphead wrasse) ]

Gene ID: 121518935, updated on 7-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC121518935
Gene description
acetylcholine receptor subunit gamma-like
See related
EnsemblRapid:ENSCUDG00000006661
Gene type
protein coding
RefSeq status
MODEL
Organism
Cheilinus undulatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Cheilinus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC121518935 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
12
Annotation release Status Assembly LG Location
100 current ASM1832078v1 (GCF_018320785.1) 12 NC_054876.1 (38159825..38170044, complement)

Linkage Group 12 - NC_054876.1Genomic Context describing neighboring genes Neighboring gene phospholipase D2 Neighboring gene transfer RNA histidin (anticodon GUG) Neighboring gene acetylcholine receptor subunit gamma-like Neighboring gene glycolipid transfer protein domain containing 2b

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_054876.1 Chromosome 12 Reference ASM1832078v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylcholine-gated monoatomic cation-selective channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
acetylcholine receptor subunit gamma-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cheilinus undulatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1832078v1 Primary Assembly

Genomic

  1. NC_054876.1 Reference ASM1832078v1 Primary Assembly

    Range
    38159825..38170044 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041801640.1 → XP_041657574.1  acetylcholine receptor subunit gamma-like

    Related
    ENSCUDP00000015630.1, ENSCUDT00000015923.1
    Conserved Domains (2) summary
    TIGR00860
    Location:26 → 494
    LIC; Cation transporter family protein
    cl28912
    Location:51 → 244
    LGIC_ECD; extracellular domain (ECD) of Cys-loop neurotransmitter-gated ion channels (also known as ligand-gated ion channel (LGIC))
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases