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galnt18b UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18b [ Cheilinus undulatus (humphead wrasse) ]

Gene ID: 121510187, updated on 22-Mar-2024

Summary

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Gene symbol
galnt18b
Gene description
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18b
See related
EnsemblRapid:ENSCUDG00000019159
Gene type
protein coding
RefSeq status
MODEL
Organism
Cheilinus undulatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Cheilinus
Orthologs
human zebrafish all
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Genomic context

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See galnt18b in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly LG Location
100 current ASM1832078v1 (GCF_018320785.1) 1 NC_054865.1 (35772768..35926122)

Linkage Group 1 - NC_054865.1Genomic Context describing neighboring genes Neighboring gene BTB (POZ) domain containing 10b Neighboring gene parathyroid hormone 1b Neighboring gene eukaryotic translation initiation factor 4 gamma 2-like Neighboring gene CTR9 homolog, Paf1/RNA polymerase II complex component

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054865.1 Chromosome 1 Reference ASM1832078v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 18

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cheilinus undulatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1832078v1 Primary Assembly

Genomic

  1. NC_054865.1 Reference ASM1832078v1 Primary Assembly

    Range
    35772768..35926122
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041788138.1 → XP_041644072.1  polypeptide N-acetylgalactosaminyltransferase 18

    Related
    ENSCUDP00000048756.1, ENSCUDT00000049438.1
    Conserved Domains (2) summary
    cd02510
    Location:159 → 460
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:473 → 600
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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