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ndst3 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 [ Cheilinus undulatus (humphead wrasse) ]

Gene ID: 121507984, updated on 22-Mar-2024

Summary

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Gene symbol
ndst3
Gene description
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
See related
EnsemblRapid:ENSCUDG00000012705
Gene type
protein coding
RefSeq status
MODEL
Organism
Cheilinus undulatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Cheilinus
Orthologs
zebrafish all
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Genomic context

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See ndst3 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
15
Annotation release Status Assembly LG Location
100 current ASM1832078v1 (GCF_018320785.1) 4 NC_054868.1 (32456394..32534794, complement)

Linkage Group 4 - NC_054868.1Genomic Context describing neighboring genes Neighboring gene methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit Neighboring gene serine protease 12 Neighboring gene UDP glycosyltransferase 8 Neighboring gene SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054868.1 Chromosome 4 Reference ASM1832078v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cheilinus undulatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1832078v1 Primary Assembly

Genomic

  1. NC_054868.1 Reference ASM1832078v1 Primary Assembly

    Range
    32456394..32534794 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041784420.1 → XP_041640354.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4

    Related
    ENSCUDP00000030235.1, ENSCUDT00000030665.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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