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NT5M 5',3'-nucleotidase, mitochondrial [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121500481, updated on 22-Mar-2024

Summary

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Gene symbol
NT5M
Gene description
5',3'-nucleotidase, mitochondrial
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See NT5M in Genome Data Viewer
Location:
chromosome: 10
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) 10 NC_054833.1 (68483041..68530239, complement)

Chromosome 10 - NC_054833.1Genomic Context describing neighboring genes Neighboring gene mediator complex subunit 9 Neighboring gene 60S ribosomal protein L32-like Neighboring gene RNA-binding protein EWS-like Neighboring gene COP9 signalosome subunit 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054833.1 Chromosome 10 Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5'-nucleotidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pyrimidine deoxyribonucleotide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
5'(3')-deoxyribonucleotidase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054833.1 Reference ASM1834538v1 Primary Assembly

    Range
    68483041..68530239 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041772204.1 → XP_041628138.1  5'(3')-deoxyribonucleotidase, mitochondrial isoform X1

    Conserved Domains (1) summary
    cd02587
    Location:37 → 206
    HAD_5-3dNT; 5'(3')-deoxyribonucleotidase

  2. XM_041772205.1 → XP_041628139.1  5'(3')-deoxyribonucleotidase, mitochondrial isoform X2

    Conserved Domains (1) summary
    cd02587
    Location:37 → 200
    HAD_5-3dNT; 5'(3')-deoxyribonucleotidase
Nucleotide Protein Strain
Heading Accession and Version

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