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SLC35B3 solute carrier family 35 member B3 [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121499960, updated on 22-Mar-2024

Summary

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Gene symbol
SLC35B3
Gene description
solute carrier family 35 member B3
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See SLC35B3 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) 10 NC_054833.1 (17863706..17890358)

Chromosome 10 - NC_054833.1Genomic Context describing neighboring genes Neighboring gene protein PIMREG-like Neighboring gene L-lactate dehydrogenase B chain-like Neighboring gene rRNA-processing protein FCF1 homolog Neighboring gene eukaryotic translation elongation factor 1 epsilon 1 Neighboring gene biogenesis of lysosomal organelles complex 1 subunit 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054833.1 Chromosome 10 Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
adenosine 3'-phospho 5'-phosphosulfate transporter 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054833.1 Reference ASM1834538v1 Primary Assembly

    Range
    17863706..17890358
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041771262.1 → XP_041627196.1  adenosine 3'-phospho 5'-phosphosulfate transporter 2 isoform X1

    Conserved Domains (1) summary
    pfam08449
    Location:103 → 394
    UAA; UAA transporter family

  2. XM_041771264.1 → XP_041627198.1  adenosine 3'-phospho 5'-phosphosulfate transporter 2 isoform X2

    Conserved Domains (1) summary
    pfam08449
    Location:48 → 339
    UAA; UAA transporter family

  3. XM_041771267.1 → XP_041627201.1  adenosine 3'-phospho 5'-phosphosulfate transporter 2 isoform X2

    Conserved Domains (1) summary
    pfam08449
    Location:48 → 339
    UAA; UAA transporter family

  4. XM_041771263.1 → XP_041627197.1  adenosine 3'-phospho 5'-phosphosulfate transporter 2 isoform X2

    Conserved Domains (1) summary
    pfam08449
    Location:48 → 339
    UAA; UAA transporter family

  5. XM_041771266.1 → XP_041627200.1  adenosine 3'-phospho 5'-phosphosulfate transporter 2 isoform X2

    Conserved Domains (1) summary
    pfam08449
    Location:48 → 339
    UAA; UAA transporter family

RNA

  1. XR_005990272.1 RNA Sequence

  2. XR_005990271.1 RNA Sequence

  3. XR_005990273.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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