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COG6 component of oligomeric golgi complex 6 [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121497013, updated on 22-Mar-2024

Summary

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Gene symbol
COG6
Gene description
component of oligomeric golgi complex 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See COG6 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
24
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) 8 NC_054831.1 (49779439..49980394)

Chromosome 8 - NC_054831.1Genomic Context describing neighboring genes Neighboring gene NHL repeat containing 3 Neighboring gene 60S ribosomal protein L7-like 1 Neighboring gene LHFPL tetraspan subfamily member 6 Neighboring gene guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like Neighboring gene oligosaccharyltransferase complex subunit OSTC-like Neighboring gene heterogeneous nuclear ribonucleoprotein C-like Neighboring gene uncharacterized LOC121496575

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054831.1 Chromosome 8 Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054831.1 Reference ASM1834538v1 Primary Assembly

    Range
    49779439..49980394
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041765987.1 → XP_041621921.1  conserved oligomeric Golgi complex subunit 6 isoform X4

    Conserved Domains (1) summary
    smart01087
    Location:68 → 609
    COG6; Conserved oligomeric complex COG6

  2. XM_041765989.1 → XP_041621923.1  conserved oligomeric Golgi complex subunit 6 isoform X6

    Conserved Domains (1) summary
    smart01087
    Location:68 → 609
    COG6; Conserved oligomeric complex COG6

  3. XM_041765990.1 → XP_041621924.1  conserved oligomeric Golgi complex subunit 6 isoform X7

    Conserved Domains (1) summary
    smart01087
    Location:68 → 609
    COG6; Conserved oligomeric complex COG6

  4. XM_041765986.1 → XP_041621920.1  conserved oligomeric Golgi complex subunit 6 isoform X3

    Conserved Domains (1) summary
    smart01087
    Location:68 → 609
    COG6; Conserved oligomeric complex COG6

  5. XM_041765984.1 → XP_041621918.1  conserved oligomeric Golgi complex subunit 6 isoform X1

    Conserved Domains (1) summary
    smart01087
    Location:68 → 656
    COG6; Conserved oligomeric complex COG6

  6. XM_041765985.1 → XP_041621919.1  conserved oligomeric Golgi complex subunit 6 isoform X2

    Conserved Domains (1) summary
    smart01087
    Location:68 → 620
    COG6; Conserved oligomeric complex COG6

  7. XM_041765988.1 → XP_041621922.1  conserved oligomeric Golgi complex subunit 6 isoform X5

    Conserved Domains (1) summary
    smart01087
    Location:68 → 608
    COG6; Conserved oligomeric complex COG6
Nucleotide Protein Strain
Heading Accession and Version

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