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PLA2G2C phospholipase A2 group IIC [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121496555, updated on 18-Sep-2024

Summary

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Gene symbol
PLA2G2C
Gene description
phospholipase A2 group IIC
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See PLA2G2C in Genome Data Viewer
Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) 8 NC_054831.1 (127810304..127831627)

Chromosome 8 - NC_054831.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121496491 Neighboring gene von Willebrand factor A domain containing 5B1 Neighboring gene UBX domain protein 10 Neighboring gene phospholipase A2 group IIF Neighboring gene group IID secretory phospholipase A2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054831.1 Chromosome 8 Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in arachidonate secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of fibroblast proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative inactive group IIC secretory phospholipase A2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054831.1 Reference ASM1834538v1 Primary Assembly

    Range
    127810304..127831627
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041764951.1 → XP_041620885.1  putative inactive group IIC secretory phospholipase A2

    Conserved Domains (1) summary
    cl05417
    Location:21 → 145
    PLA2_like; Phospholipase A2, a super-family of secretory and cytosolic enzymes; the latter are either Ca dependent or Ca independent. PLA2 cleaves the sn-2 position of the glycerol backbone of phospholipids (PC or phosphatidylethanolamine), usually in a ...
Nucleotide Protein Strain
Heading Accession and Version

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