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SUMF1 sulfatase modifying factor 1 [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121496285, updated on 22-Mar-2024

Summary

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Gene symbol
SUMF1
Gene description
sulfatase modifying factor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See SUMF1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) 7 NC_054830.1 (44993064..45117510, complement)

Chromosome 7 - NC_054830.1Genomic Context describing neighboring genes Neighboring gene spliceosome-associated protein CWC15 homolog Neighboring gene uncharacterized LOC121496292 Neighboring gene histone-lysine N-methyltransferase SETMAR Neighboring gene histone deacetylase complex subunit SAP18-like Neighboring gene inositol 1,4,5-trisphosphate receptor type 1 Neighboring gene uncharacterized LOC121495035

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054830.1 Chromosome 7 Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
formylglycine-generating enzyme

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054830.1 Reference ASM1834538v1 Primary Assembly

    Range
    44993064..45117510 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041764727.1 → XP_041620661.1  formylglycine-generating enzyme isoform X2

    Conserved Domains (1) summary
    COG1262
    Location:81 → 313
    YfmG; Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain [Posttranslational modification, protein turnover, chaperones]

  2. XM_041764726.1 → XP_041620660.1  formylglycine-generating enzyme isoform X1

    Conserved Domains (1) summary
    COG1262
    Location:81 → 371
    YfmG; Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein Strain
Heading Accession and Version

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