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ACO1 aconitase 1 [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121495390, updated on 22-Mar-2024

Summary

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Gene symbol
ACO1
Gene description
aconitase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See ACO1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
22
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) 7 NC_054830.1 (83044324..83109343, complement)

Chromosome 7 - NC_054830.1Genomic Context describing neighboring genes Neighboring gene TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase Neighboring gene RNA sensor RIG-I Neighboring gene COP9 signalosome complex subunit 3-like Neighboring gene GTP-binding nuclear protein Ran-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054830.1 Chromosome 7 Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables aconitate hydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron-responsive element binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in citrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytoplasmic aconitate hydratase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054830.1 Reference ASM1834538v1 Primary Assembly

    Range
    83044324..83109343 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041762780.1 → XP_041618714.1  cytoplasmic aconitate hydratase

    Conserved Domains (1) summary
    PTZ00092
    Location:2 → 889
    PTZ00092; aconitate hydratase-like protein; Provisional

  2. XM_041762781.1 → XP_041618715.1  cytoplasmic aconitate hydratase

    Conserved Domains (1) summary
    PTZ00092
    Location:2 → 889
    PTZ00092; aconitate hydratase-like protein; Provisional
Nucleotide Protein Strain
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