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BCKDHB branched chain keto acid dehydrogenase E1 subunit beta [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121495360, updated on 11-Apr-2024

Summary

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Gene symbol
BCKDHB
Gene description
branched chain keto acid dehydrogenase E1 subunit beta
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See BCKDHB in Genome Data Viewer
Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) 1 NC_054824.1 (31729436..31939228, complement)

Chromosome 1 - NC_054824.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene 40S ribosomal protein S17-like Neighboring gene TTK protein kinase Neighboring gene ELOVL fatty acid elongase 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054824.1 Chromosome 1 Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in branched-chain amino acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to nutrient IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054824.1 Reference ASM1834538v1 Primary Assembly

    Range
    31729436..31939228 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041762713.1 → XP_041618647.1  2-oxoisovalerate dehydrogenase subunit beta, mitochondrial

    Conserved Domains (1) summary
    PTZ00182
    Location:32 → 385
    PTZ00182; 3-methyl-2-oxobutanate dehydrogenase; Provisional
Nucleotide Protein Strain
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Gene LinkOut

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