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PYGL glycogen phosphorylase L [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121492918, updated on 22-Mar-2024

Summary

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Gene symbol
PYGL
Gene description
glycogen phosphorylase L
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See PYGL in Genome Data Viewer
Location:
chromosome: 6
Exon count:
20
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) 6 NC_054829.1 (46274276..46316479)

Chromosome 6 - NC_054829.1Genomic Context describing neighboring genes Neighboring gene fibroblast growth factor receptor substrate 2-like Neighboring gene uncharacterized LOC121492922 Neighboring gene abhydrolase domain containing 12B Neighboring gene ninein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054829.1 Chromosome 6 Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycogen phosphorylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogen phosphorylase, liver form

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054829.1 Reference ASM1834538v1 Primary Assembly

    Range
    46274276..46316479
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041758231.1 → XP_041614165.1  glycogen phosphorylase, liver form

    Conserved Domains (1) summary
    cd04300
    Location:29 → 827
    GT35_Glycogen_Phosphorylase; glycogen phosphorylase and similar proteins
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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