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PIP4K2C phosphatidylinositol-5-phosphate 4-kinase type 2 gamma [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121492069, updated on 22-Mar-2024

Summary

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Gene symbol
PIP4K2C
Gene description
phosphatidylinositol-5-phosphate 4-kinase type 2 gamma
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See PIP4K2C in Genome Data Viewer
Location:
chromosome: 5
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) 5 NC_054828.1 (67938083..67949485, complement)

Chromosome 5 - NC_054828.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121492073 Neighboring gene Rho guanine nucleotide exchange factor 25 Neighboring gene deltex E3 ubiquitin ligase 3 Neighboring gene kinesin family member 5A Neighboring gene dynactin subunit 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054828.1 Chromosome 5 Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol 5-phosphate 4-kinase type-2 gamma

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054828.1 Reference ASM1834538v1 Primary Assembly

    Range
    67938083..67949485 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041757320.1 → XP_041613254.1  phosphatidylinositol 5-phosphate 4-kinase type-2 gamma isoform X4

    Conserved Domains (1) summary
    cd17311
    Location:45 → 417
    PIPKc_PIP5K2C; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain found in Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma (PIP5K2C) and similar proteins

  2. XM_041757319.1 → XP_041613253.1  phosphatidylinositol 5-phosphate 4-kinase type-2 gamma isoform X3

    Conserved Domains (1) summary
    cl28923
    Location:45 → 442
    PIPKc; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain family

  3. XM_041757318.1 → XP_041613252.1  phosphatidylinositol 5-phosphate 4-kinase type-2 gamma isoform X2

    Conserved Domains (2) summary
    cd17311
    Location:298 → 658
    PIPKc_PIP5K2C; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain found in Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma (PIP5K2C) and similar proteins
    cl28923
    Location:35 → 59
    PIPKc; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain family

  4. XM_041757317.1 → XP_041613251.1  phosphatidylinositol 5-phosphate 4-kinase type-2 gamma isoform X1

    Conserved Domains (1) summary
    cl28923
    Location:298 → 683
    PIPKc; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain family
Nucleotide Protein Strain
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