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LPIN1 lipin 1 [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121491470, updated on 22-Mar-2024

Summary

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Gene symbol
LPIN1
Gene description
lipin 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See LPIN1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
24
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) 5 NC_054828.1 (125268068..125400831, complement)

Chromosome 5 - NC_054828.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121491991 Neighboring gene uncharacterized LOC121492151 Neighboring gene neurotensin receptor 2 Neighboring gene growth regulating estrogen receptor binding 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054828.1 Chromosome 5 Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to insulin stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidate phosphatase LPIN1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054828.1 Reference ASM1834538v1 Primary Assembly

    Range
    125268068..125400831 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041756413.1 → XP_041612347.1  phosphatidate phosphatase LPIN1 isoform X1

    Conserved Domains (3) summary
    smart00775
    Location:761 → 917
    LNS2; This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins
    PHA03307
    Location:274 → 472
    PHA03307; transcriptional regulator ICP4; Provisional
    COG5083
    Location:49 → 162
    SMP2; Phosphatidate phosphatase PAH1, contains Lipin and LNS2 domains. can be involved in plasmid maintenance [Lipid transport and metabolism]

  2. XM_041756415.1 → XP_041612349.1  phosphatidate phosphatase LPIN1 isoform X2

    Conserved Domains (3) summary
    smart00775
    Location:713 → 869
    LNS2; This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins
    PHA03307
    Location:113 → 424
    PHA03307; transcriptional regulator ICP4; Provisional
    COG5083
    Location:1 → 114
    SMP2; Phosphatidate phosphatase PAH1, contains Lipin and LNS2 domains. can be involved in plasmid maintenance [Lipid transport and metabolism]

  3. XM_041756414.1 → XP_041612348.1  phosphatidate phosphatase LPIN1 isoform X2

    Conserved Domains (3) summary
    smart00775
    Location:713 → 869
    LNS2; This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins
    PHA03307
    Location:113 → 424
    PHA03307; transcriptional regulator ICP4; Provisional
    COG5083
    Location:1 → 114
    SMP2; Phosphatidate phosphatase PAH1, contains Lipin and LNS2 domains. can be involved in plasmid maintenance [Lipid transport and metabolism]
Nucleotide Protein Strain
Heading Accession and Version

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