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ACO2 aconitase 2 [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121490624, updated on 22-Mar-2024

Summary

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Gene symbol
ACO2
Gene description
aconitase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See ACO2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
19
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) 5 NC_054828.1 (7554566..7607992, complement)

Chromosome 5 - NC_054828.1Genomic Context describing neighboring genes Neighboring gene phosphomannomutase 1 Neighboring gene cold shock domain containing C2 Neighboring gene RNA polymerase III subunit H Neighboring gene PHD finger protein 5A Neighboring gene transducer of ERBB2, 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054828.1 Chromosome 5 Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables aconitate hydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aconitate hydratase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054828.1 Reference ASM1834538v1 Primary Assembly

    Range
    7554566..7607992 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041754444.1 → XP_041610378.1  aconitate hydratase, mitochondrial isoform X1

    Conserved Domains (1) summary
    TIGR01340
    Location:45 → 775
    aconitase_mito; aconitate hydratase, mitochondrial

  2. XM_041754445.1 → XP_041610379.1  aconitate hydratase, mitochondrial isoform X2

    Conserved Domains (1) summary
    TIGR01340
    Location:43 → 773
    aconitase_mito; aconitate hydratase, mitochondrial
Nucleotide Protein Strain
Heading Accession and Version

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