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ACOT12 acyl-CoA thioesterase 12 [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121489896, updated on 22-Mar-2024

Summary

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Gene symbol
ACOT12
Gene description
acyl-CoA thioesterase 12
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See ACOT12 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
15
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) 4 NC_054827.1 (85889904..85933706)

Chromosome 4 - NC_054827.1Genomic Context describing neighboring genes Neighboring gene single stranded DNA binding protein 2 Neighboring gene uncharacterized LOC121489901 Neighboring gene uncharacterized LOC121489900 Neighboring gene cyclin-I-like Neighboring gene zinc finger CCHC-type containing 9

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054827.1 Chromosome 4 Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetyl-CoA hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetyl-coenzyme A thioesterase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054827.1 Reference ASM1834538v1 Primary Assembly

    Range
    85889904..85933706
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041753344.1 → XP_041609278.1  acetyl-coenzyme A thioesterase

    Conserved Domains (2) summary
    cd08914
    Location:309 → 544
    START_STARD15-like; Lipid-binding START domain of mammalian STARD15 and related proteins
    cd03442
    Location:3 → 115
    BFIT_BACH; Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, ...
Nucleotide Protein Strain
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