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CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121489366, updated on 22-Mar-2024

Summary

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Gene symbol
CSGALNACT1
Gene description
chondroitin sulfate N-acetylgalactosaminyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See CSGALNACT1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
17
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) 4 NC_054827.1 (37011177..37267762)

Chromosome 4 - NC_054827.1Genomic Context describing neighboring genes Neighboring gene translation initiation factor IF-2-like Neighboring gene keratin, type I cytoskeletal 18-like Neighboring gene SH2 domain containing 4A Neighboring gene basic salivary proline-rich protein 2-like Neighboring gene keratin, type I cytoskeletal 18-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054827.1 Chromosome 4 Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054827.1 Reference ASM1834538v1 Primary Assembly

    Range
    37011177..37267762
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041752350.1 → XP_041608284.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    cl11394
    Location:427 → 474
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_041752352.1 → XP_041608286.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    cl11394
    Location:427 → 474
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  3. XM_041752349.1 → XP_041608283.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    cl11394
    Location:427 → 474
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  4. XM_041752358.1 → XP_041608292.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    cl11394
    Location:427 → 474
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  5. XM_041752353.1 → XP_041608287.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    cl11394
    Location:427 → 474
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  6. XM_041752361.1 → XP_041608295.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    cl11394
    Location:427 → 474
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  7. XM_041752351.1 → XP_041608285.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    cl11394
    Location:427 → 474
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  8. XM_041752359.1 → XP_041608293.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    cl11394
    Location:427 → 474
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  9. XM_041752356.1 → XP_041608290.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    cl11394
    Location:427 → 474
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  10. XM_041752354.1 → XP_041608288.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    cl11394
    Location:427 → 474
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  11. XM_041752360.1 → XP_041608294.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    cl11394
    Location:427 → 474
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  12. XM_041752362.1 → XP_041608296.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    cl11394
    Location:427 → 474
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  13. XM_041752355.1 → XP_041608289.1  chondroitin sulfate N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    cl11394
    Location:427 → 474
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein Strain
Heading Accession and Version

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