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XYLT1 xylosyltransferase 1 [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121487401, updated on 22-Mar-2024

Summary

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Gene symbol
XYLT1
Gene description
xylosyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See XYLT1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
13
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) 3 NC_054826.1 (115778706..116081954, complement)

Chromosome 3 - NC_054826.1Genomic Context describing neighboring genes Neighboring gene nucleolar protein 16-like Neighboring gene ribosomal protein S15a Neighboring gene uncharacterized LOC121488277 Neighboring gene nodal modulator 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054826.1 Chromosome 3 Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heparan sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xylosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054826.1 Reference ASM1834538v1 Primary Assembly

    Range
    115778706..116081954 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041749083.1 → XP_041605017.1  xylosyltransferase 1 isoform X1

    Conserved Domains (1) summary
    cl27418
    Location:338 → 623
    Branch; Core-2/I-Branching enzyme

  2. XM_041749084.1 → XP_041605018.1  xylosyltransferase 1 isoform X2

    Conserved Domains (1) summary
    cl27418
    Location:240 → 525
    Branch; Core-2/I-Branching enzyme
Nucleotide Protein Strain
Heading Accession and Version

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