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ITPKB inositol-trisphosphate 3-kinase B [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121486929, updated on 22-Mar-2024

Summary

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Gene symbol
ITPKB
Gene description
inositol-trisphosphate 3-kinase B
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See ITPKB in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) 1 NC_054824.1 (147779033..147870353, complement)

Chromosome 1 - NC_054824.1Genomic Context describing neighboring genes Neighboring gene poly(ADP-ribose) polymerase 1 Neighboring gene stum, mechanosensory transduction mediator homolog Neighboring gene uncharacterized LOC121499867 Neighboring gene presenilin 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054824.1 Chromosome 1 Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables inositol tetrakisphosphate kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables inositol-1,4,5-trisphosphate 3-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in inositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inositol-trisphosphate 3-kinase B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054824.1 Reference ASM1834538v1 Primary Assembly

    Range
    147779033..147870353 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041748383.1 → XP_041604317.1  inositol-trisphosphate 3-kinase B isoform X1

    Conserved Domains (2) summary
    PRK07764
    Location:8 → 405
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    cl12283
    Location:686 → 924
    IPK; Inositol polyphosphate kinase

  2. XM_041748392.1 → XP_041604326.1  inositol-trisphosphate 3-kinase B isoform X2

    Conserved Domains (1) summary
    PRK07764
    Location:8 → 405
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
Nucleotide Protein Strain
Heading Accession and Version

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