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ACSM3 acyl-CoA synthetase medium chain family member 3 [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121486563, updated on 22-Mar-2024

Summary

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Gene symbol
ACSM3
Gene description
acyl-CoA synthetase medium chain family member 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See ACSM3 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
15
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) 3 NC_054826.1 (113600353..113637637, complement)

Chromosome 3 - NC_054826.1Genomic Context describing neighboring genes Neighboring gene defective in cullin neddylation 1 domain containing 3 Neighboring gene RNA exonuclease 5 Neighboring gene ERI1 exoribonuclease family member 2 Neighboring gene acyl-coenzyme A synthetase ACSM4, mitochondrial Neighboring gene THUMP domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054826.1 Chromosome 3 Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acid ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty-acyl-CoA synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acyl-coenzyme A synthetase ACSM3, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054826.1 Reference ASM1834538v1 Primary Assembly

    Range
    113600353..113637637 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041747517.1 → XP_041603451.1  acyl-coenzyme A synthetase ACSM3, mitochondrial isoform X2

    Conserved Domains (1) summary
    cl17068
    Location:48 → 564
    AFD_class_I; Adenylate forming domain, Class I superfamily

  2. XM_041747515.1 → XP_041603449.1  acyl-coenzyme A synthetase ACSM3, mitochondrial isoform X1

    Conserved Domains (1) summary
    cd05928
    Location:48 → 577
    MACS_euk; Eukaryotic Medium-chain acyl-CoA synthetase (MACS or ACSM)

  3. XM_041747516.1 → XP_041603450.1  acyl-coenzyme A synthetase ACSM3, mitochondrial isoform X1

    Conserved Domains (1) summary
    cd05928
    Location:48 → 577
    MACS_euk; Eukaryotic Medium-chain acyl-CoA synthetase (MACS or ACSM)
Nucleotide Protein Strain
Heading Accession and Version

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