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OTOA otoancorin [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121486246, updated on 22-Mar-2024

Summary

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Gene symbol
OTOA
Gene description
otoancorin
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See OTOA in Genome Data Viewer
Location:
chromosome: 3
Exon count:
28
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) 3 NC_054826.1 (112036270..112099435, complement)

Chromosome 3 - NC_054826.1Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 31 Neighboring gene heparan sulfate-glucosamine 3-sulfotransferase 2 Neighboring gene methyltransferase 9, His-X-His N1(pi)-histidine Neighboring gene transmembrane protein 180-like Neighboring gene immunoglobulin superfamily member 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054826.1 Chromosome 3 Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
otoancorin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054826.1 Reference ASM1834538v1 Primary Assembly

    Range
    112036270..112099435 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041747073.1 → XP_041603007.1  otoancorin

    Conserved Domains (1) summary
    pfam06060
    Location:579 → 982
    Mesothelin; Pre-pro-megakaryocyte potentiating factor precursor (Mesothelin)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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