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GANC glucosidase alpha, neutral C [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121485769, updated on 22-Mar-2024

Summary

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Gene symbol
GANC
Gene description
glucosidase alpha, neutral C
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See GANC in Genome Data Viewer
Location:
chromosome: 2
Exon count:
27
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) 2 NC_054825.1 (72582039..72656819, complement)

Chromosome 2 - NC_054825.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 106 Neighboring gene calpain 3 Neighboring gene U6 spliceosomal RNA Neighboring gene transmembrane protein 87A Neighboring gene VPS39 subunit of HOPS complex

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054825.1 Chromosome 2 Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neutral alpha-glucosidase C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054825.1 Reference ASM1834538v1 Primary Assembly

    Range
    72582039..72656819 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041746534.1 → XP_041602468.1  neutral alpha-glucosidase C isoform X2

    Conserved Domains (2) summary
    cd06603
    Location:353 → 820
    GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
    cd14752
    Location:213 → 353
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

  2. XM_041746532.1 → XP_041602466.1  neutral alpha-glucosidase C isoform X1

    Conserved Domains (2) summary
    cd06603
    Location:353 → 820
    GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
    cd14752
    Location:213 → 353
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

  3. XM_041746536.1 → XP_041602470.1  neutral alpha-glucosidase C isoform X4

    Conserved Domains (2) summary
    cd06603
    Location:353 → 751
    GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
    cd14752
    Location:213 → 353
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

  4. XM_041746535.1 → XP_041602469.1  neutral alpha-glucosidase C isoform X3

    Conserved Domains (2) summary
    cd06603
    Location:353 → 782
    GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
    cd14752
    Location:213 → 353
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

  5. XM_041746531.1 → XP_041602465.1  neutral alpha-glucosidase C isoform X1

    Conserved Domains (2) summary
    cd06603
    Location:353 → 820
    GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
    cd14752
    Location:213 → 353
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

  6. XM_041746533.1 → XP_041602467.1  neutral alpha-glucosidase C isoform X1

    Conserved Domains (2) summary
    cd06603
    Location:353 → 820
    GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
    cd14752
    Location:213 → 353
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

RNA

  1. XR_005986362.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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