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PIP5K1B phosphatidylinositol-4-phosphate 5-kinase type 1 beta [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121484551, updated on 22-Mar-2024

Summary

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Gene symbol
PIP5K1B
Gene description
phosphatidylinositol-4-phosphate 5-kinase type 1 beta
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See PIP5K1B in Genome Data Viewer
Location:
chromosome: 2
Exon count:
16
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) 2 NC_054825.1 (145396846..145701064, complement)

Chromosome 2 - NC_054825.1Genomic Context describing neighboring genes Neighboring gene tight junction protein 2 Neighboring gene 60S ribosomal protein L7a-like Neighboring gene translation initiation factor IF-2-like Neighboring gene uncharacterized LOC121484553 Neighboring gene frataxin Neighboring gene PP2A Aalpha (PPP2R1A) and B55A (PPP2R2A) interacting phosphatase regulator 1 Neighboring gene uncharacterized LOC121485835 Neighboring gene uncharacterized LOC121485836

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054825.1 Chromosome 2 Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol 4-phosphate 5-kinase type-1 beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054825.1 Reference ASM1834538v1 Primary Assembly

    Range
    145396846..145701064 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041743955.1 → XP_041599889.1  phosphatidylinositol 4-phosphate 5-kinase type-1 beta

    Conserved Domains (1) summary
    cd17307
    Location:27 → 400
    PIPKc_PIP5K1B; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain found in phosphatidylinositol 4-phosphate 5-kinase type-1 beta (PIP5K1beta) and similar proteins

  2. XM_041743956.1 → XP_041599890.1  phosphatidylinositol 4-phosphate 5-kinase type-1 beta

    Conserved Domains (1) summary
    cd17307
    Location:27 → 400
    PIPKc_PIP5K1B; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain found in phosphatidylinositol 4-phosphate 5-kinase type-1 beta (PIP5K1beta) and similar proteins
Nucleotide Protein Strain
Heading Accession and Version

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