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HACD3 3-hydroxyacyl-CoA dehydratase 3 [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121484235, updated on 22-Mar-2024

Summary

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Gene symbol
HACD3
Gene description
3-hydroxyacyl-CoA dehydratase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See HACD3 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) 2 NC_054825.1 (51796886..51836519, complement)

Chromosome 2 - NC_054825.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 24 member 1 Neighboring gene integrator complex subunit 14 Neighboring gene 60S ribosomal protein L36-like Neighboring gene homeobox protein Hox-D9-like Neighboring gene dipeptidyl peptidase 8 Neighboring gene immunoglobulin superfamily DCC subclass member 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054825.1 Chromosome 2 Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-hydroxyacyl-CoA dehydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054825.1 Reference ASM1834538v1 Primary Assembly

    Range
    51796886..51836519 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041743164.1 → XP_041599098.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3

    Conserved Domains (2) summary
    cd06465
    Location:8 → 115
    p23_hB-ind1_like; p23_like domain found in human (h) butyrate-induced transcript 1 (B-ind1) and similar proteins. hB-ind1 participates in signaling by the small GTPase Rac1. It binds to Rac1 and enhances different Rac1 effects including activation of nuclear factor (NF) ...
    pfam04387
    Location:195 → 355
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA
Nucleotide Protein Strain
Heading Accession and Version

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