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ACADSB acyl-CoA dehydrogenase short/branched chain [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121484200, updated on 22-Mar-2024

Summary

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Gene symbol
ACADSB
Gene description
acyl-CoA dehydrogenase short/branched chain
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See ACADSB in Genome Data Viewer
Location:
chromosome: 2
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) 2 NC_054825.1 (8640745..8683417, complement)

Chromosome 2 - NC_054825.1Genomic Context describing neighboring genes Neighboring gene H6 family homeobox 2 Neighboring gene H6 family homeobox 3 Neighboring gene IKAROS family zinc finger 5 Neighboring gene phosphoseryl-tRNA kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054825.1 Chromosome 2 Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl-CoA dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
short/branched chain specific acyl-CoA dehydrogenase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054825.1 Reference ASM1834538v1 Primary Assembly

    Range
    8640745..8683417 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041743073.1 → XP_041599007.1  short/branched chain specific acyl-CoA dehydrogenase, mitochondrial isoform X3

    Conserved Domains (1) summary
    cl09933
    Location:1 → 328
    ACAD; Acyl-CoA dehydrogenase

  2. XM_041743072.1 → XP_041599006.1  short/branched chain specific acyl-CoA dehydrogenase, mitochondrial isoform X2

    Conserved Domains (1) summary
    cd01158
    Location:5 → 375
    SCAD_SBCAD; Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases

  3. XM_041743071.1 → XP_041599005.1  short/branched chain specific acyl-CoA dehydrogenase, mitochondrial isoform X1

    Conserved Domains (1) summary
    cd01158
    Location:60 → 430
    SCAD_SBCAD; Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases
Nucleotide Protein Strain
Heading Accession and Version

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