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CHST7 carbohydrate sulfotransferase 7 [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121483454, updated on 22-Mar-2024

Summary

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Gene symbol
CHST7
Gene description
carbohydrate sulfotransferase 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See CHST7 in Genome Data Viewer
Location:
chromosome: X
Exon count:
2
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) X NC_054848.1 (40278404..40307836)

Chromosome X - NC_054848.1Genomic Context describing neighboring genes Neighboring gene dr1-associated corepressor-like Neighboring gene splicing factor 1-like Neighboring gene COMM domain-containing protein 6-like Neighboring gene solute carrier family 9 member A7 Neighboring gene RP2 activator of ARL3 GTPase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054848.1 Chromosome X Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chondroitin 6-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054848.1 Reference ASM1834538v1 Primary Assembly

    Range
    40278404..40307836
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041742016.1 → XP_041597950.1  carbohydrate sulfotransferase 7

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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