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GYG2 glycogenin 2 [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121482954, updated on 22-Mar-2024

Summary

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Gene symbol
GYG2
Gene description
glycogenin 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human all
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Genomic context

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See GYG2 in Genome Data Viewer
Location:
chromosome: X
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) X NC_054848.1 (1439873..1476478)

Chromosome X - NC_054848.1Genomic Context describing neighboring genes Neighboring gene CD99 molecule (Xg blood group) Neighboring gene Xg glycoprotein (Xg blood group) Neighboring gene translation initiation factor IF-2-like Neighboring gene arylsulfatase D-like Neighboring gene arylsulfatase L

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054848.1 Chromosome X Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogenin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054848.1 Reference ASM1834538v1 Primary Assembly

    Range
    1439873..1476478
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041741104.1 → XP_041597038.1  glycogenin-2 isoform X3

    Conserved Domains (1) summary
    cd02537
    Location:6 → 257
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  2. XM_041741099.1 → XP_041597033.1  glycogenin-2 isoform X1

    Conserved Domains (1) summary
    cd02537
    Location:6 → 257
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  3. XM_041741103.1 → XP_041597037.1  glycogenin-2 isoform X2

    Conserved Domains (1) summary
    cd02537
    Location:6 → 257
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  4. XM_041741100.1 → XP_041597034.1  glycogenin-2 isoform X1

    Conserved Domains (1) summary
    cd02537
    Location:6 → 257
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  5. XM_041741101.1 → XP_041597035.1  glycogenin-2 isoform X1

    Conserved Domains (1) summary
    cd02537
    Location:6 → 257
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
Nucleotide Protein Strain
Heading Accession and Version

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