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B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121477463, updated on 22-Mar-2024

Summary

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Gene symbol
B3GALNT1
Gene description
beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See B3GALNT1 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) 17 NC_054840.1 (14983518..15008887)

Chromosome 17 - NC_054840.1Genomic Context describing neighboring genes Neighboring gene NMD3 ribosome export adaptor Neighboring gene translation initiation factor IF-2-like Neighboring gene U6 spliceosomal RNA Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1L Neighboring gene 60S ribosomal protein L26-like Neighboring gene basic proline-rich protein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054840.1 Chromosome 17 Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054840.1 Reference ASM1834538v1 Primary Assembly

    Range
    14983518..15008887
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041731794.1 → XP_041587728.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  2. XM_041731800.1 → XP_041587734.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  3. XM_041731790.1 → XP_041587724.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  4. XM_041731807.1 → XP_041587741.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  5. XM_041731787.1 → XP_041587721.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  6. XM_041731796.1 → XP_041587730.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  7. XM_041731817.1 → XP_041587751.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  8. XM_041731808.1 → XP_041587742.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  9. XM_041731802.1 → XP_041587736.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  10. XM_041731798.1 → XP_041587732.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  11. XM_041731789.1 → XP_041587723.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  12. XM_041731814.1 → XP_041587748.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  13. XM_041731815.1 → XP_041587749.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  14. XM_041731783.1 → XP_041587717.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  15. XM_041731785.1 → XP_041587719.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  16. XM_041731791.1 → XP_041587725.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  17. XM_041731803.1 → XP_041587737.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  18. XM_041731811.1 → XP_041587745.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  19. XM_041731784.1 → XP_041587718.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  20. XM_041731782.1 → XP_041587716.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  21. XM_041731810.1 → XP_041587744.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  22. XM_041731780.1 → XP_041587714.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  23. XM_041731812.1 → XP_041587746.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  24. XM_041731793.1 → XP_041587727.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  25. XM_041731804.1 → XP_041587738.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  26. XM_041731816.1 → XP_041587750.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  27. XM_041731799.1 → XP_041587733.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  28. XM_041731781.1 → XP_041587715.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  29. XM_041731806.1 → XP_041587740.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  30. XM_041731792.1 → XP_041587726.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  31. XM_041731786.1 → XP_041587720.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  32. XM_041731813.1 → XP_041587747.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  33. XM_041731797.1 → XP_041587731.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  34. XM_041731805.1 → XP_041587739.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  35. XM_041731788.1 → XP_041587722.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  36. XM_041731795.1 → XP_041587729.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase

  37. XM_041731801.1 → XP_041587735.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1

    Conserved Domains (1) summary
    pfam01762
    Location:92 → 285
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein Strain
Heading Accession and Version

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