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RTN4R reticulon 4 receptor [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121475797, updated on 22-Mar-2024

Summary

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Gene symbol
RTN4R
Gene description
reticulon 4 receptor
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See RTN4R in Genome Data Viewer
Location:
chromosome: 14
Exon count:
2
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) 14 NC_054837.1 (7883607..7908931)

Chromosome 14 - NC_054837.1Genomic Context describing neighboring genes Neighboring gene proline dehydrogenase 1, mitochondrial-like Neighboring gene DiGeorge syndrome critical region gene 6 like Neighboring gene coiled-coil domain containing 188 Neighboring gene zinc finger DHHC-type palmitoyltransferase 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054837.1 Chromosome 14 Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
reticulon-4 receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054837.1 Reference ASM1834538v1 Primary Assembly

    Range
    7883607..7908931
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041729396.1 → XP_041585330.1  reticulon-4 receptor

    Conserved Domains (3) summary
    COG4886
    Location:104 → 260
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:60 → 82
    LRR_RI; leucine-rich repeat [structural motif]
    cl15307
    Location:260 → 296
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
Nucleotide Protein Strain
Heading Accession and Version

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