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SPACA3 sperm acrosome associated 3 [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121472771, updated on 22-Mar-2024

Summary

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Gene symbol
SPACA3
Gene description
sperm acrosome associated 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See SPACA3 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) 12 NC_054835.1 (21369680..21373845)

Chromosome 12 - NC_054835.1Genomic Context describing neighboring genes Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like Neighboring gene transmembrane protein 98 Neighboring gene acid sensing ion channel subunit 2 Neighboring gene THAP domain-containing protein 2-like Neighboring gene coiled-coil domain-containing protein 90B, mitochondrial-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054835.1 Chromosome 12 Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysozyme activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fusion of sperm to egg plasma membrane involved in single fertilization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in acrosomal vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sperm flagellum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sperm acrosome membrane-associated protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054835.1 Reference ASM1834538v1 Primary Assembly

    Range
    21369680..21373845
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041724160.1 → XP_041580094.1  sperm acrosome membrane-associated protein 3

    Conserved Domains (1) summary
    cd16897
    Location:37 → 161
    LYZ_C; C-type lysozyme
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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