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GALNT3 polypeptide N-acetylgalactosaminyltransferase 3 [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121472365, updated on 22-Mar-2024

Summary

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Gene symbol
GALNT3
Gene description
polypeptide N-acetylgalactosaminyltransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See GALNT3 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) 11 NC_054834.1 (90260199..90303348, complement)

Chromosome 11 - NC_054834.1Genomic Context describing neighboring genes Neighboring gene sodium channel protein type 3 subunit alpha Neighboring gene sodium channel protein type 2 subunit alpha Neighboring gene cysteine and serine rich nuclear protein 3 Neighboring gene tetratricopeptide repeat domain 21B Neighboring gene protein CEBPZOS-like Neighboring gene sodium voltage-gated channel alpha subunit 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054834.1 Chromosome 11 Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054834.1 Reference ASM1834538v1 Primary Assembly

    Range
    90260199..90303348 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041723671.1 → XP_041579605.1  polypeptide N-acetylgalactosaminyltransferase 3

    Conserved Domains (2) summary
    cd02510
    Location:187 → 492
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:505 → 626
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_041723672.1 → XP_041579606.1  polypeptide N-acetylgalactosaminyltransferase 3

    Conserved Domains (2) summary
    cd02510
    Location:187 → 492
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:505 → 626
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein Strain
Heading Accession and Version

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