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PLA2R1 phospholipase A2 receptor 1 [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121471936, updated on 22-Mar-2024

Summary

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Gene symbol
PLA2R1
Gene description
phospholipase A2 receptor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See PLA2R1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
30
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) 11 NC_054834.1 (85033501..85147024, complement)

Chromosome 11 - NC_054834.1Genomic Context describing neighboring genes Neighboring gene lymphocyte antigen 75 Neighboring gene 40S ribosomal protein S23-like Neighboring gene integrin subunit beta 6 Neighboring gene RNA binding motif single stranded interacting protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054834.1 Chromosome 11 Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
secretory phospholipase A2 receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054834.1 Reference ASM1834538v1 Primary Assembly

    Range
    85033501..85147024 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041722839.1 → XP_041578773.1  secretory phospholipase A2 receptor isoform X2

    Conserved Domains (4) summary
    smart00059
    Location:168 → 216
    FN2; Fibronectin type 2 domain
    cd00037
    Location:239 → 353
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    smart00034
    Location:375 → 499
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00458
    Location:40 → 125
    RICIN; Ricin-type beta-trefoil

  2. XM_041722838.1 → XP_041578772.1  secretory phospholipase A2 receptor isoform X1

    Conserved Domains (4) summary
    smart00059
    Location:168 → 216
    FN2; Fibronectin type 2 domain
    cd00037
    Location:239 → 353
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    smart00034
    Location:375 → 499
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
    smart00458
    Location:40 → 125
    RICIN; Ricin-type beta-trefoil
Nucleotide Protein Strain
Heading Accession and Version

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