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PRG3 proteoglycan 3, pro eosinophil major basic protein 2 [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121471680, updated on 22-Mar-2024

Summary

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Gene symbol
PRG3
Gene description
proteoglycan 3, pro eosinophil major basic protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See PRG3 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) 11 NC_054834.1 (62948295..62953438)

Chromosome 11 - NC_054834.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 43 member 3 Neighboring gene bone marrow proteoglycan-like Neighboring gene purinergic receptor P2X 3 Neighboring gene structure specific recognition protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054834.1 Chromosome 11 Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proteoglycan 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054834.1 Reference ASM1834538v1 Primary Assembly

    Range
    62948295..62953438
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041722458.1 → XP_041578392.1  proteoglycan 3 isoform X1

    Conserved Domains (1) summary
    cd03598
    Location:113 → 229
    CLECT_EMBP_like; C-type lectin-like domain (CTLD) of the type found in the human proteins, eosinophil major basic protein (EMBP) and prepro major basic protein homolog (MBPH)

  2. XM_041722459.1 → XP_041578393.1  proteoglycan 3 isoform X2

    Conserved Domains (1) summary
    cd03598
    Location:109 → 225
    CLECT_EMBP_like; C-type lectin-like domain (CTLD) of the type found in the human proteins, eosinophil major basic protein (EMBP) and prepro major basic protein homolog (MBPH)

  3. XM_041722460.1 → XP_041578394.1  proteoglycan 3 isoform X2

    Conserved Domains (1) summary
    cd03598
    Location:109 → 225
    CLECT_EMBP_like; C-type lectin-like domain (CTLD) of the type found in the human proteins, eosinophil major basic protein (EMBP) and prepro major basic protein homolog (MBPH)
Nucleotide Protein Strain
Heading Accession and Version

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