U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

KIRREL1 kirre like nephrin family adhesion molecule 1 [ Vulpes lagopus (Arctic fox) ]

Gene ID: 121471244, updated on 22-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
KIRREL1
Gene description
kirre like nephrin family adhesion molecule 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes lagopus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See KIRREL1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
15
Annotation release Status Assembly Chr Location
100 current ASM1834538v1 (GCF_018345385.1) 11 NC_054834.1 (25609245..25673126)

Chromosome 11 - NC_054834.1Genomic Context describing neighboring genes Neighboring gene sushi domain containing 4 Neighboring gene coiled-coil domain containing 185 Neighboring gene uncharacterized LOC121471245 Neighboring gene transcription initiation factor TFIID subunit 4-like Neighboring gene CD1d molecule

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_054834.1 Chromosome 11 Reference ASM1834538v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
kin of IRRE-like protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Vulpes lagopus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834538v1 Primary Assembly

Genomic

  1. NC_054834.1 Reference ASM1834538v1 Primary Assembly

    Range
    25609245..25673126
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041721703.1 → XP_041577637.1  kin of IRRE-like protein 1 isoform X1

    Conserved Domains (4) summary
    smart00409
    Location:314 → 405
    IG; Immunoglobulin
    smart00410
    Location:230 → 304
    IG_like; Immunoglobulin like
    cd00096
    Location:425 → 429
    Ig; Ig strand B [structural motif]
    cl11960
    Location:407 → 504
    Ig; Immunoglobulin domain

  2. XM_041721704.1 → XP_041577638.1  kin of IRRE-like protein 1 isoform X2

    Conserved Domains (5) summary
    smart00408
    Location:321 → 373
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:230 → 304
    IG; Immunoglobulin
    smart00410
    Location:27 → 116
    IG_like; Immunoglobulin like
    cd00096
    Location:409 → 413
    Ig; Ig strand B [structural motif]
    cl11960
    Location:391 → 488
    Ig; Immunoglobulin domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.